Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC003101.2-201ENST00000612557 442 ntBASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC116407.2-201ENST00000613639 860 ntBASIC5.86□□□□□ -1.47
HMCN1Q96RW7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 EED-207ENST00000528180 1745 ntTSL 5 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 TBC1D3P2-202ENST00000577902 1649 ntBASIC5.86□□□□□ -1.47
HMCN1Q96RW7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 TFP1-202ENST00000475455 1573 ntBASIC5.86□□□□□ -1.47
HMCN1Q96RW7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC069262.1-201ENST00000539058 672 ntBASIC5.86□□□□□ -1.47
HMCN1Q96RW7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC012640.2-201ENST00000561606 901 ntBASIC5.86□□□□□ -1.47
HMCN1Q96RW7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 AL355877.3-201ENST00000622820 899 ntBASIC5.86□□□□□ -1.47
HMCN1Q96RW7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC5.86□□□□□ -1.47
HMCN1Q96RW7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 NME6-203ENST00000415644 849 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 MCCD1P2-201ENST00000423228 335 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AC096582.2-201ENST00000510860 516 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AC018553.1-201ENST00000616682 1458 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 PTBP1P-201ENST00000554374 1601 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 TUBB8P6-201ENST00000436895 1288 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AL132655.2-201ENST00000596276 594 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AL133338.1-201ENST00000565695 1517 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 RNA5SP416-201ENST00000516838 111 ntBASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC5.85□□□□□ -1.47
HMCN1Q96RW7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms