Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TWNKQ96RR1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TWNKQ96RR1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TWNKQ96RR1 CRYGFP-201ENST00000418459 633 ntBASIC20.34■□□□□ 0.85
TWNKQ96RR1 MFAP1P1-201ENST00000442257 1255 ntBASIC20.34■□□□□ 0.85
TWNKQ96RR1 FITM1-202ENST00000559294 800 ntBASIC20.34■□□□□ 0.85
TWNKQ96RR1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TWNKQ96RR1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.34■□□□□ 0.85
TWNKQ96RR1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TWNKQ96RR1 AL049812.1-201ENST00000432563 2267 ntBASIC20.34■□□□□ 0.85
TWNKQ96RR1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.34■□□□□ 0.85
TWNKQ96RR1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TWNKQ96RR1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.34■□□□□ 0.85
TWNKQ96RR1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TWNKQ96RR1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TWNKQ96RR1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
TWNKQ96RR1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TWNKQ96RR1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.33■□□□□ 0.85
TWNKQ96RR1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TWNKQ96RR1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TWNKQ96RR1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TWNKQ96RR1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TWNKQ96RR1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.33■□□□□ 0.85
TWNKQ96RR1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.33■□□□□ 0.85
TWNKQ96RR1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TWNKQ96RR1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TWNKQ96RR1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TWNKQ96RR1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TWNKQ96RR1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TWNKQ96RR1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TWNKQ96RR1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.33■□□□□ 0.84
TWNKQ96RR1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TWNKQ96RR1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TWNKQ96RR1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.33■□□□□ 0.84
TWNKQ96RR1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 AL161938.1-201ENST00000569833 2180 ntBASIC20.32■□□□□ 0.84
TWNKQ96RR1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.32■□□□□ 0.84
TWNKQ96RR1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 AP005242.2-201ENST00000580065 1175 ntBASIC20.32■□□□□ 0.84
TWNKQ96RR1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
TWNKQ96RR1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TWNKQ96RR1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TWNKQ96RR1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.31■□□□□ 0.84
TWNKQ96RR1 CYP2D8P-201ENST00000433633 1490 ntBASIC20.31■□□□□ 0.84
TWNKQ96RR1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TWNKQ96RR1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TWNKQ96RR1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TWNKQ96RR1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TWNKQ96RR1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.31■□□□□ 0.84
TWNKQ96RR1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.31■□□□□ 0.84
TWNKQ96RR1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.31■□□□□ 0.84
TWNKQ96RR1 PRSS44-201ENST00000515154 1146 ntBASIC20.31■□□□□ 0.84
TWNKQ96RR1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TWNKQ96RR1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TWNKQ96RR1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
TWNKQ96RR1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TWNKQ96RR1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TWNKQ96RR1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TWNKQ96RR1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 FP475955.4-201ENST00000623131 1990 ntBASIC20.3■□□□□ 0.84
TWNKQ96RR1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TWNKQ96RR1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms