Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 MYC-209ENST00000641252 345 ntBASIC17.4■□□□□ 0.38
SNX18Q96RF0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX18Q96RF0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX18Q96RF0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.39■□□□□ 0.38
SNX18Q96RF0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNX18Q96RF0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 AC083880.1-201ENST00000608266 535 ntBASIC17.39■□□□□ 0.37
SNX18Q96RF0 AL121906.2-201ENST00000621597 723 ntBASIC17.39■□□□□ 0.37
SNX18Q96RF0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SNX18Q96RF0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX18Q96RF0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.38■□□□□ 0.37
SNX18Q96RF0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 KRT18P29-201ENST00000397031 1267 ntBASIC17.38■□□□□ 0.37
SNX18Q96RF0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 AC066615.1-201ENST00000640911 628 ntBASIC17.38■□□□□ 0.37
SNX18Q96RF0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX18Q96RF0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX18Q96RF0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 RPS2P52-201ENST00000469610 820 ntBASIC17.37■□□□□ 0.37
SNX18Q96RF0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 AC060766.5-201ENST00000590539 871 ntBASIC17.37■□□□□ 0.37
SNX18Q96RF0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SNX18Q96RF0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX18Q96RF0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms