Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
NEK1Q96PY6 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.68■■□□□ 1.22
NEK1Q96PY6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 AL158047.1-201ENST00000445918 881 ntBASIC22.68■■□□□ 1.22
NEK1Q96PY6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.68■■□□□ 1.22
NEK1Q96PY6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.68■■□□□ 1.22
NEK1Q96PY6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.68■■□□□ 1.22
NEK1Q96PY6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
NEK1Q96PY6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.67■■□□□ 1.22
NEK1Q96PY6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
NEK1Q96PY6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.67■■□□□ 1.22
NEK1Q96PY6 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.67■■□□□ 1.22
NEK1Q96PY6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.67■■□□□ 1.22
NEK1Q96PY6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.67■■□□□ 1.22
NEK1Q96PY6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
NEK1Q96PY6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK1Q96PY6 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.66■■□□□ 1.22
NEK1Q96PY6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 AC073195.1-201ENST00000607241 877 ntBASIC22.66■■□□□ 1.22
NEK1Q96PY6 CR392000.1-201ENST00000624770 1228 ntBASIC22.66■■□□□ 1.22
NEK1Q96PY6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
NEK1Q96PY6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK1Q96PY6 KRT16P1-201ENST00000399124 1418 ntBASIC22.65■■□□□ 1.22
NEK1Q96PY6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 UBE2SP1-201ENST00000450587 669 ntBASIC22.65■■□□□ 1.22
NEK1Q96PY6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK1Q96PY6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
NEK1Q96PY6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
NEK1Q96PY6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NEK1Q96PY6 AC006333.2-201ENST00000607957 2099 ntBASIC22.64■■□□□ 1.22
NEK1Q96PY6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.64■■□□□ 1.22
NEK1Q96PY6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NEK1Q96PY6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NEK1Q96PY6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.64■■□□□ 1.21
NEK1Q96PY6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
NEK1Q96PY6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.64■■□□□ 1.21
NEK1Q96PY6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
NEK1Q96PY6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.64■■□□□ 1.21
NEK1Q96PY6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NEK1Q96PY6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.64■■□□□ 1.21
NEK1Q96PY6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.64■■□□□ 1.21
NEK1Q96PY6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NEK1Q96PY6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
NEK1Q96PY6 AC004408.2-201ENST00000623613 2777 ntBASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms