Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 AC026471.6-201ENST00000622954 1905 ntBASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 AKR1C7P-201ENST00000305623 895 ntBASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 FAM8A3P-201ENST00000427218 844 ntBASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 DRAXINP1-201ENST00000437611 948 ntBASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.29■□□□□ 0.52
CNTNAP3BQ96NU0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 AC010542.4-201ENST00000563151 1910 ntBASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 TOB2P1-201ENST00000469761 992 ntBASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 TP73-AS1-207ENST00000624167 988 ntBASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNTNAP3BQ96NU0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 AC026310.3-201ENST00000625186 2373 ntBASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.27■□□□□ 0.52
CNTNAP3BQ96NU0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CNTNAP3BQ96NU0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNTNAP3BQ96NU0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms