Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 AC012313.1-201ENST00000593393 3059 ntBASIC14.63□□□□□ -0.07
LINC00479Q96M42 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 AC007322.4-201ENST00000509611 723 ntBASIC14.63□□□□□ -0.07
LINC00479Q96M42 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 AC013268.1-206ENST00000638368 961 ntBASIC14.63□□□□□ -0.07
LINC00479Q96M42 AC112229.1-201ENST00000639295 961 ntBASIC14.63□□□□□ -0.07
LINC00479Q96M42 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 AC116351.2-201ENST00000606540 1585 ntBASIC14.63□□□□□ -0.07
LINC00479Q96M42 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00479Q96M42 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC00479Q96M42 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 AL355472.2-201ENST00000422958 438 ntBASIC14.62□□□□□ -0.07
LINC00479Q96M42 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LINC00479Q96M42 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00479Q96M42 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00479Q96M42 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LINC00479Q96M42 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms