Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.68■□□□□ 0.9
SNX27Q96L92 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNX27Q96L92 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.68■□□□□ 0.9
SNX27Q96L92 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 AL137013.1-201ENST00000432946 1228 ntBASIC20.68■□□□□ 0.9
SNX27Q96L92 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX27Q96L92 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.68■□□□□ 0.9
SNX27Q96L92 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX27Q96L92 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SNX27Q96L92 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX27Q96L92 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SNX27Q96L92 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
SNX27Q96L92 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX27Q96L92 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX27Q96L92 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SNX27Q96L92 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX27Q96L92 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SNX27Q96L92 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
SNX27Q96L92 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX27Q96L92 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SNX27Q96L92 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.67■□□□□ 0.9
SNX27Q96L92 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SNX27Q96L92 TSPY17P-201ENST00000450329 467 ntBASIC20.67■□□□□ 0.9
SNX27Q96L92 AL353719.1-201ENST00000566847 864 ntBASIC20.67■□□□□ 0.9
SNX27Q96L92 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SNX27Q96L92 AC010653.2-201ENST00000623505 997 ntBASIC20.67■□□□□ 0.9
SNX27Q96L92 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SNX27Q96L92 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX27Q96L92 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX27Q96L92 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SNX27Q96L92 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX27Q96L92 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX27Q96L92 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX27Q96L92 HMGA1P5-201ENST00000412453 271 ntBASIC20.66■□□□□ 0.9
SNX27Q96L92 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.66■□□□□ 0.9
SNX27Q96L92 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.66■□□□□ 0.9
SNX27Q96L92 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 AC023511.2-201ENST00000618803 211 ntBASIC20.66■□□□□ 0.9
SNX27Q96L92 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX27Q96L92 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX27Q96L92 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX27Q96L92 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.65■□□□□ 0.9
SNX27Q96L92 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SNX27Q96L92 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SNX27Q96L92 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.65■□□□□ 0.9
SNX27Q96L92 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.65■□□□□ 0.9
SNX27Q96L92 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.65■□□□□ 0.9
SNX27Q96L92 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX27Q96L92 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.65■□□□□ 0.9
SNX27Q96L92 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.64■□□□□ 0.9
SNX27Q96L92 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.64■□□□□ 0.9
SNX27Q96L92 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNX27Q96L92 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.64■□□□□ 0.89
SNX27Q96L92 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SNX27Q96L92 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SNX27Q96L92 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX27Q96L92 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.64■□□□□ 0.89
SNX27Q96L92 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX27Q96L92 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.64■□□□□ 0.89
SNX27Q96L92 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX27Q96L92 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SNX27Q96L92 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX27Q96L92 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX27Q96L92 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX27Q96L92 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SNX27Q96L92 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms