Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.25■□□□□ 0.83
CALR3Q96L12 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CALR3Q96L12 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.25■□□□□ 0.83
CALR3Q96L12 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.25■□□□□ 0.83
CALR3Q96L12 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.25■□□□□ 0.83
CALR3Q96L12 NCF1B-203ENST00000435988 1254 ntBASIC20.25■□□□□ 0.83
CALR3Q96L12 GUSBP6-202ENST00000438529 1198 ntBASIC20.25■□□□□ 0.83
CALR3Q96L12 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.25■□□□□ 0.83
CALR3Q96L12 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.25■□□□□ 0.83
CALR3Q96L12 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 IKBKGP1-201ENST00000612193 1073 ntBASIC20.25■□□□□ 0.83
CALR3Q96L12 AC104581.1-202ENST00000635932 2618 ntBASIC20.25■□□□□ 0.83
CALR3Q96L12 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.25■□□□□ 0.83
CALR3Q96L12 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CALR3Q96L12 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALR3Q96L12 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CALR3Q96L12 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.24■□□□□ 0.83
CALR3Q96L12 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.24■□□□□ 0.83
CALR3Q96L12 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.24■□□□□ 0.83
CALR3Q96L12 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 AC083906.6-201ENST00000641366 219 ntBASIC20.24■□□□□ 0.83
CALR3Q96L12 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CALR3Q96L12 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 AC090164.3-201ENST00000610780 2143 ntBASIC20.24■□□□□ 0.83
CALR3Q96L12 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CALR3Q96L12 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.24■□□□□ 0.83
CALR3Q96L12 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CALR3Q96L12 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CALR3Q96L12 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
CALR3Q96L12 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 AL512353.2-201ENST00000448759 1962 ntBASIC20.23■□□□□ 0.83
CALR3Q96L12 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CALR3Q96L12 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.23■□□□□ 0.83
CALR3Q96L12 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.23■□□□□ 0.83
CALR3Q96L12 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.23■□□□□ 0.83
CALR3Q96L12 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CALR3Q96L12 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CALR3Q96L12 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.23■□□□□ 0.83
CALR3Q96L12 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.23■□□□□ 0.83
CALR3Q96L12 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.23■□□□□ 0.83
CALR3Q96L12 AC007613.1-201ENST00000572811 2597 ntBASIC20.23■□□□□ 0.83
CALR3Q96L12 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CALR3Q96L12 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALR3Q96L12 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CALR3Q96L12 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CALR3Q96L12 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CALR3Q96L12 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CALR3Q96L12 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.22■□□□□ 0.83
CALR3Q96L12 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CALR3Q96L12 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.22■□□□□ 0.83
CALR3Q96L12 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.22■□□□□ 0.83
CALR3Q96L12 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.22■□□□□ 0.83
CALR3Q96L12 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CALR3Q96L12 AC008687.6-201ENST00000596318 630 ntBASIC20.22■□□□□ 0.83
CALR3Q96L12 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALR3Q96L12 AL390961.4-201ENST00000623958 2535 ntBASIC20.22■□□□□ 0.83
CALR3Q96L12 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.22■□□□□ 0.83
CALR3Q96L12 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALR3Q96L12 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.22■□□□□ 0.83
CALR3Q96L12 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CALR3Q96L12 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CALR3Q96L12 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALR3Q96L12 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALR3Q96L12 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.21■□□□□ 0.83
CALR3Q96L12 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CALR3Q96L12 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALR3Q96L12 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
CALR3Q96L12 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.21■□□□□ 0.83
CALR3Q96L12 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALR3Q96L12 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms