Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 AC034268.1-201ENST00000441047 882 ntBASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CHMP6Q96FZ7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CHMP6Q96FZ7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.27■□□□□ 0.67
CHMP6Q96FZ7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP6Q96FZ7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP6Q96FZ7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP6Q96FZ7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.27■□□□□ 0.67
CHMP6Q96FZ7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 NTF6G-201ENST00000591094 616 ntBASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP6Q96FZ7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 IRX1P1-201ENST00000438849 1838 ntBASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 KRT18P20-201ENST00000548986 1279 ntBASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP6Q96FZ7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms