Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL353807.1-201ENST00000427475 662 ntBASIC19.72■□□□□ 0.75
IFT43Q96FT9 TSPY7P-201ENST00000431358 1114 ntBASIC19.72■□□□□ 0.75
IFT43Q96FT9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 KRT18P16-201ENST00000510337 1294 ntBASIC19.72■□□□□ 0.75
IFT43Q96FT9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 BX088651.1-201ENST00000540551 451 ntBASIC19.72■□□□□ 0.75
IFT43Q96FT9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
IFT43Q96FT9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IFT43Q96FT9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IFT43Q96FT9 KRT8P8-201ENST00000434750 1448 ntBASIC19.71■□□□□ 0.75
IFT43Q96FT9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFT43Q96FT9 AC116562.4-201ENST00000641316 2276 ntBASIC19.71■□□□□ 0.75
IFT43Q96FT9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFT43Q96FT9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IFT43Q96FT9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFT43Q96FT9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
IFT43Q96FT9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFT43Q96FT9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFT43Q96FT9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 NEFHP1-201ENST00000412845 2629 ntBASIC19.7■□□□□ 0.74
IFT43Q96FT9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 LINC01023-201ENST00000606054 436 ntBASIC19.7■□□□□ 0.74
IFT43Q96FT9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFT43Q96FT9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.7■□□□□ 0.74
IFT43Q96FT9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 AC211429.1-201ENST00000415277 523 ntBASIC19.69■□□□□ 0.74
IFT43Q96FT9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.69■□□□□ 0.74
IFT43Q96FT9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFT43Q96FT9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.68■□□□□ 0.74
IFT43Q96FT9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFT43Q96FT9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms