Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 AL596275.1-201ENST00000423464 877 ntBASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 AL355355.2-201ENST00000442321 338 ntBASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 TSPY7P-201ENST00000431358 1114 ntBASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 AP003071.4-201ENST00000562276 1284 ntBASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 CKBP1-201ENST00000565489 1086 ntBASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 AP000974.1-201ENST00000623909 2387 ntBASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTHRC1Q96CG8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTHRC1Q96CG8 AC096733.2-201ENST00000609937 1394 ntBASIC17.77■□□□□ 0.43
CTHRC1Q96CG8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.77■□□□□ 0.43
CTHRC1Q96CG8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 MIR4785-201ENST00000585005 73 ntBASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTHRC1Q96CG8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 SNORA78-201ENST00000459373 127 ntBASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 MIR4497-201ENST00000583208 89 ntBASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 AC098818.2-201ENST00000564925 2320 ntBASIC17.75■□□□□ 0.43
CTHRC1Q96CG8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms