Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBE2E3Q969T4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2E3Q969T4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 AL161938.1-201ENST00000569833 2180 ntBASIC18.4■□□□□ 0.54
UBE2E3Q969T4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
UBE2E3Q969T4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UBE2E3Q969T4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
UBE2E3Q969T4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBE2E3Q969T4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 AC073195.1-201ENST00000607241 877 ntBASIC18.39■□□□□ 0.53
UBE2E3Q969T4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 IRX1P1-201ENST00000438849 1838 ntBASIC18.39■□□□□ 0.53
UBE2E3Q969T4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.39■□□□□ 0.53
UBE2E3Q969T4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 KRT16P1-201ENST00000399124 1418 ntBASIC18.39■□□□□ 0.53
UBE2E3Q969T4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2E3Q969T4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2E3Q969T4 AP000974.1-201ENST00000623909 2387 ntBASIC18.38■□□□□ 0.53
UBE2E3Q969T4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms