Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 YBX1P10-201ENST00000444752 975 ntBASIC15.11■□□□□ 0.01
NPIPB3Q92617 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB3Q92617 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB3Q92617 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB3Q92617 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB3Q92617 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB3Q92617 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB3Q92617 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB3Q92617 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPB3Q92617 AC092368.3-202ENST00000574180 1591 ntBASIC15.11■□□□□ 0.01
NPIPB3Q92617 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB3Q92617 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 IRX1P1-201ENST00000438849 1838 ntBASIC15.1■□□□□ 0.01
NPIPB3Q92617 AC104581.1-202ENST00000635932 2618 ntBASIC15.1■□□□□ 0.01
NPIPB3Q92617 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB3Q92617 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 SLC29A4P1-201ENST00000398760 971 ntBASIC15.09■□□□□ 0.01
NPIPB3Q92617 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
NPIPB3Q92617 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB3Q92617 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms