Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HERVK_113Q902F9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HERVK_113Q902F9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 AL136038.4-201ENST00000603606 1261 ntBASIC20.57■□□□□ 0.88
HERVK_113Q902F9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERVK_113Q902F9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 TOB2P1-201ENST00000469761 992 ntBASIC20.56■□□□□ 0.88
HERVK_113Q902F9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 AL671883.3-201ENST00000603274 991 ntBASIC20.56■□□□□ 0.88
HERVK_113Q902F9 AL121912.1-201ENST00000603683 238 ntBASIC20.56■□□□□ 0.88
HERVK_113Q902F9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 AL391807.1-203ENST00000604392 2365 ntBASIC20.56■□□□□ 0.88
HERVK_113Q902F9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HERVK_113Q902F9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 AC036111.1-201ENST00000533973 1582 ntBASIC20.55■□□□□ 0.88
HERVK_113Q902F9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 MRPL3P1-201ENST00000400109 1033 ntBASIC20.55■□□□□ 0.88
HERVK_113Q902F9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 AL157888.1-201ENST00000631930 593 ntBASIC20.55■□□□□ 0.88
HERVK_113Q902F9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.55■□□□□ 0.88
HERVK_113Q902F9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HERVK_113Q902F9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 AL023284.2-201ENST00000405850 579 ntBASIC20.54■□□□□ 0.88
HERVK_113Q902F9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 RNF126P1-202ENST00000569893 925 ntBASIC20.54■□□□□ 0.88
HERVK_113Q902F9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 BX640515.1-201ENST00000617215 977 ntBASIC20.54■□□□□ 0.88
HERVK_113Q902F9 AC139530.3-201ENST00000620344 690 ntBASIC20.54■□□□□ 0.88
HERVK_113Q902F9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 AC117500.6-201ENST00000624871 588 ntBASIC20.54■□□□□ 0.88
HERVK_113Q902F9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
HERVK_113Q902F9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HERVK_113Q902F9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms