Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 SOX15-203ENST00000570788 1093 ntBASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C1orf54Q8WWF1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
C1orf54Q8WWF1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
C1orf54Q8WWF1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
C1orf54Q8WWF1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.89■□□□□ 0.78
C1orf54Q8WWF1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C1orf54Q8WWF1 AL512353.2-201ENST00000448759 1962 ntBASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 AL121829.2-201ENST00000620908 328 ntBASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
C1orf54Q8WWF1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 AC093525.10-201ENST00000625130 1569 ntBASIC19.87■□□□□ 0.77
C1orf54Q8WWF1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms