Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 MIR4651-201ENST00000582622 73 ntBASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 POU5F1P3-201ENST00000428824 1078 ntBASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 AC006333.2-201ENST00000607957 2099 ntBASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCHCR1Q8TD31 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 POM121L13P-201ENST00000422362 380 ntBASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 AC008403.3-201ENST00000598924 454 ntBASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCHCR1Q8TD31 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 TSPY20P-201ENST00000450910 630 ntBASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 RPS2P52-201ENST00000469610 820 ntBASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCHCR1Q8TD31 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms