Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 UBE2SP1-201ENST00000450587 669 ntBASIC20.55■□□□□ 0.88
LMO3Q8TAP4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMO3Q8TAP4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 AC026271.3-201ENST00000571884 352 ntBASIC20.54■□□□□ 0.88
LMO3Q8TAP4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 AL031985.4-201ENST00000642138 673 ntBASIC20.54■□□□□ 0.88
LMO3Q8TAP4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
LMO3Q8TAP4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 RPS2P55-201ENST00000397318 883 ntBASIC20.53■□□□□ 0.88
LMO3Q8TAP4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 AC107956.1-201ENST00000494359 873 ntBASIC20.53■□□□□ 0.88
LMO3Q8TAP4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.53■□□□□ 0.88
LMO3Q8TAP4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 AC004951.3-201ENST00000418645 1148 ntBASIC20.52■□□□□ 0.88
LMO3Q8TAP4 FAM197Y1-201ENST00000421178 764 ntBASIC20.52■□□□□ 0.88
LMO3Q8TAP4 B3GAT3P1-201ENST00000471720 806 ntBASIC20.52■□□□□ 0.88
LMO3Q8TAP4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMO3Q8TAP4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.52■□□□□ 0.87
LMO3Q8TAP4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LMO3Q8TAP4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LMO3Q8TAP4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AC093525.10-201ENST00000625130 1569 ntBASIC20.51■□□□□ 0.87
LMO3Q8TAP4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.51■□□□□ 0.87
LMO3Q8TAP4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms