Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.6■■□□□ 1.37
RTL9Q8NET4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 PCED1CP-201ENST00000419887 785 ntBASIC23.6■■□□□ 1.37
RTL9Q8NET4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 KRT18P38-201ENST00000449496 1282 ntBASIC23.6■■□□□ 1.37
RTL9Q8NET4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 CR769767.2-201ENST00000622735 460 ntBASIC23.6■■□□□ 1.37
RTL9Q8NET4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.59■■□□□ 1.37
RTL9Q8NET4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
RTL9Q8NET4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.59■■□□□ 1.37
RTL9Q8NET4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.59■■□□□ 1.37
RTL9Q8NET4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.59■■□□□ 1.37
RTL9Q8NET4 TREX1-205ENST00000625293 1783 ntBASIC23.59■■□□□ 1.37
RTL9Q8NET4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 KRT126P-201ENST00000549467 1181 ntBASIC23.59■■□□□ 1.37
RTL9Q8NET4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.59■■□□□ 1.37
RTL9Q8NET4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RTL9Q8NET4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL9Q8NET4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.59■■□□□ 1.37
RTL9Q8NET4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTL9Q8NET4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
RTL9Q8NET4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTL9Q8NET4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.58■■□□□ 1.37
RTL9Q8NET4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.58■■□□□ 1.37
RTL9Q8NET4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTL9Q8NET4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
RTL9Q8NET4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTL9Q8NET4 AL359075.1-203ENST00000462729 1002 ntBASIC23.58■■□□□ 1.37
RTL9Q8NET4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RTL9Q8NET4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RTL9Q8NET4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTL9Q8NET4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RTL9Q8NET4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.58■■□□□ 1.36
RTL9Q8NET4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.58■■□□□ 1.36
RTL9Q8NET4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RTL9Q8NET4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RTL9Q8NET4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
RTL9Q8NET4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 AL671277.2-201ENST00000458060 996 ntBASIC23.57■■□□□ 1.36
RTL9Q8NET4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL9Q8NET4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
RTL9Q8NET4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.56■■□□□ 1.36
RTL9Q8NET4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 AC112907.3-201ENST00000577781 2400 ntBASIC23.56■■□□□ 1.36
RTL9Q8NET4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
RTL9Q8NET4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
RTL9Q8NET4 STARP1-201ENST00000397973 869 ntBASIC23.56■■□□□ 1.36
RTL9Q8NET4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 DUSP5P1-201ENST00000441325 1139 ntBASIC23.56■■□□□ 1.36
RTL9Q8NET4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.56■■□□□ 1.36
RTL9Q8NET4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.56■■□□□ 1.36
RTL9Q8NET4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 AC140113.3-201ENST00000605663 199 ntBASIC23.56■■□□□ 1.36
RTL9Q8NET4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.56■■□□□ 1.36
RTL9Q8NET4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms