Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A9Q8NBW4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 TSPY5P-201ENST00000426936 936 ntBASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 TSPY23P-201ENST00000440136 739 ntBASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A9Q8NBW4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 FAM8A6P-201ENST00000407496 1135 ntBASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 SLC25A24-204ENST00000569674 2357 ntBASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC38A9Q8NBW4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 MYC-208ENST00000641036 567 ntBASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 TREX1-205ENST00000625293 1783 ntBASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC38A9Q8NBW4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC38A9Q8NBW4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC38A9Q8NBW4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms