Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 IRX1P1-201ENST00000438849 1838 ntBASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LINC01555Q8NAE3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 AC010947.1-201ENST00000623454 693 ntBASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01555Q8NAE3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01555Q8NAE3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms