Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC56Q8IYG6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC56Q8IYG6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 SNORA78-201ENST00000459373 127 ntBASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 AP000692.2-201ENST00000608391 879 ntBASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
LRRC56Q8IYG6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 FP475955.4-201ENST00000623131 1990 ntBASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 AL049812.1-201ENST00000432563 2267 ntBASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC56Q8IYG6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 AL355355.2-201ENST00000442321 338 ntBASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 FAM207BP-201ENST00000447172 505 ntBASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 AC093827.2-201ENST00000512654 315 ntBASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 AP003071.4-201ENST00000562276 1284 ntBASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 MIR4497-201ENST00000583208 89 ntBASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC56Q8IYG6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC56Q8IYG6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms