Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LINC00346Q8IVM7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 KRT17P3-201ENST00000420566 1262 ntBASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 AC026366.1-201ENST00000488803 879 ntBASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC00346Q8IVM7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 AC006333.2-201ENST00000607957 2099 ntBASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 KRT18P6-201ENST00000555540 1265 ntBASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
LINC00346Q8IVM7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 MTDHP1-201ENST00000605323 784 ntBASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 IRX1P1-201ENST00000438849 1838 ntBASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00346Q8IVM7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00346Q8IVM7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms