Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 AL512625.2-201ENST00000417533 625 ntBASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 AC007322.1-201ENST00000426983 750 ntBASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NUDCD3Q8IVD9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 LSM12P1-201ENST00000411836 588 ntBASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUDCD3Q8IVD9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
NUDCD3Q8IVD9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NUDCD3Q8IVD9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NUDCD3Q8IVD9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NUDCD3Q8IVD9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.02■□□□□ 0.63
NUDCD3Q8IVD9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NUDCD3Q8IVD9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 AC093787.1-201ENST00000450396 207 ntBASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 AL133373.2-201ENST00000623187 2828 ntBASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUDCD3Q8IVD9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 AL390719.1-204ENST00000412397 1219 ntBASIC19■□□□□ 0.63
NUDCD3Q8IVD9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 AL354751.1-201ENST00000412768 1863 ntBASIC19■□□□□ 0.63
NUDCD3Q8IVD9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NUDCD3Q8IVD9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms