Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.22■□□□□ 0.67
PACS2Q86VP3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.22■□□□□ 0.67
PACS2Q86VP3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.22■□□□□ 0.67
PACS2Q86VP3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PACS2Q86VP3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 AC126763.1-201ENST00000552015 2118 ntBASIC19.22■□□□□ 0.67
PACS2Q86VP3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PACS2Q86VP3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PACS2Q86VP3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PACS2Q86VP3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 SLC7A5P2-201ENST00000553010 536 ntBASIC19.21■□□□□ 0.67
PACS2Q86VP3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PACS2Q86VP3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACS2Q86VP3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 KRT16P2-201ENST00000414673 1423 ntBASIC19.2■□□□□ 0.66
PACS2Q86VP3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 AC090192.1-201ENST00000517740 490 ntBASIC19.2■□□□□ 0.66
PACS2Q86VP3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 MFSD11-216ENST00000590393 1141 ntBASIC19.2■□□□□ 0.66
PACS2Q86VP3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 AL161938.1-201ENST00000569833 2180 ntBASIC19.2■□□□□ 0.66
PACS2Q86VP3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS2Q86VP3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PACS2Q86VP3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms