Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
COLCA1Q6ZS62 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COLCA1Q6ZS62 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLCA1Q6ZS62 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
COLCA1Q6ZS62 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COLCA1Q6ZS62 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLCA1Q6ZS62 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 AC087289.5-201ENST00000586076 3175 ntBASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 RPS2P55-201ENST00000397318 883 ntBASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 AC004951.3-201ENST00000418645 1148 ntBASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 AC107956.1-201ENST00000494359 873 ntBASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 PRSS44-201ENST00000515154 1146 ntBASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 AC233702.5-201ENST00000584107 538 ntBASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 AC130371.2-201ENST00000619443 611 ntBASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 KRT8P11-201ENST00000409686 1436 ntBASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLCA1Q6ZS62 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 AC006333.2-201ENST00000607957 2099 ntBASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COLCA1Q6ZS62 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 AC008040.2-201ENST00000461049 708 ntBASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 AC011506.1-201ENST00000474329 610 ntBASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 CD177P1-201ENST00000606252 935 ntBASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 AP001412.1-201ENST00000608405 714 ntBASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COLCA1Q6ZS62 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 MESTP1-201ENST00000404287 994 ntBASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 FAM197Y1-201ENST00000421178 764 ntBASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 B3GAT3P1-201ENST00000471720 806 ntBASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.47■□□□□ 0.23
COLCA1Q6ZS62 MIR6786-201ENST00000616843 113 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms