Protein–RNA interactions for Protein: Q6UWE0

LRSAM1, E3 ubiquitin-protein ligase LRSAM1, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRSAM1Q6UWE0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRSAM1Q6UWE0 AC104417.2-201ENST00000562989 1793 ntBASIC21.79■■□□□ 1.08
LRSAM1Q6UWE0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.79■■□□□ 1.08
LRSAM1Q6UWE0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LRSAM1Q6UWE0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRSAM1Q6UWE0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRSAM1Q6UWE0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 AC008764.6-201ENST00000595909 2069 ntBASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.77■■□□□ 1.08
LRSAM1Q6UWE0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
LRSAM1Q6UWE0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 KRT18P68-201ENST00000392293 1000 ntBASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 AC010536.3-201ENST00000620306 533 ntBASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.76■■□□□ 1.07
LRSAM1Q6UWE0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 AC007322.4-201ENST00000509611 723 ntBASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRSAM1Q6UWE0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms