Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.17■■□□□ 1.46
RC3H1Q5TC82 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H1Q5TC82 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H1Q5TC82 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
RC3H1Q5TC82 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H1Q5TC82 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H1Q5TC82 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 AC104692.2-201ENST00000603054 253 ntBASIC24.16■■□□□ 1.46
RC3H1Q5TC82 IFNL4P1-201ENST00000607083 540 ntBASIC24.16■■□□□ 1.46
RC3H1Q5TC82 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H1Q5TC82 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.15■■□□□ 1.46
RC3H1Q5TC82 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 DRAXINP1-201ENST00000437611 948 ntBASIC24.15■■□□□ 1.46
RC3H1Q5TC82 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H1Q5TC82 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RC3H1Q5TC82 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RC3H1Q5TC82 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RC3H1Q5TC82 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.14■■□□□ 1.46
RC3H1Q5TC82 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RC3H1Q5TC82 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RC3H1Q5TC82 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.14■■□□□ 1.45
RC3H1Q5TC82 MIR3917-201ENST00000580971 93 ntBASIC24.14■■□□□ 1.45
RC3H1Q5TC82 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC24.14■■□□□ 1.45
RC3H1Q5TC82 AL157888.1-201ENST00000631930 593 ntBASIC24.14■■□□□ 1.45
RC3H1Q5TC82 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RC3H1Q5TC82 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC24.14■■□□□ 1.45
RC3H1Q5TC82 AL391807.1-203ENST00000604392 2365 ntBASIC24.14■■□□□ 1.45
RC3H1Q5TC82 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RC3H1Q5TC82 AC073314.1-201ENST00000568729 2216 ntBASIC24.14■■□□□ 1.45
RC3H1Q5TC82 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RC3H1Q5TC82 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 TSPY22P-201ENST00000427496 604 ntBASIC24.13■■□□□ 1.45
RC3H1Q5TC82 MCCD1P1-208ENST00000445732 328 ntBASIC24.13■■□□□ 1.45
RC3H1Q5TC82 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 EMBP1-201ENST00000458200 901 ntBASIC24.13■■□□□ 1.45
RC3H1Q5TC82 TPSP2-201ENST00000561760 610 ntBASIC24.13■■□□□ 1.45
RC3H1Q5TC82 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 AL136038.4-201ENST00000603606 1261 ntBASIC24.13■■□□□ 1.45
RC3H1Q5TC82 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H1Q5TC82 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 AC009078.2-202ENST00000463353 338 ntBASIC24.12■■□□□ 1.45
RC3H1Q5TC82 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H1Q5TC82 KRT18P1-202ENST00000452408 1331 ntBASIC24.11■■□□□ 1.45
RC3H1Q5TC82 KRT8P3-201ENST00000519669 1449 ntBASIC24.11■■□□□ 1.45
RC3H1Q5TC82 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms