Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC233702.3-201ENST00000578656 1387 ntBASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 AC099336.1-202ENST00000602961 463 ntBASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SNAPC4Q5SXM2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 AP001005.1-201ENST00000571755 1248 ntBASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 WWC2-AS2-201ENST00000578387 2183 ntBASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SNAPC4Q5SXM2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 Z83836.1-201ENST00000624605 1642 ntBASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 AL023284.2-201ENST00000405850 579 ntBASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 MIR3180-5-201ENST00000583743 153 ntBASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNAPC4Q5SXM2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SNAPC4Q5SXM2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 ABR-217ENST00000572441 563 ntTSL 4 BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 AL390719.2-201ENST00000606993 987 ntBASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
SNAPC4Q5SXM2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 ANKRD18DP-204ENST00000455355 1975 ntBASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC31.3■■■□□ 2.6
SNAPC4Q5SXM2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 AF238378.1-201ENST00000526806 358 ntBASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 AC092865.5-201ENST00000545435 363 ntBASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms