Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 AC083849.1-201ENST00000615227 514 ntBASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 HYMAI.1-201ENST00000620949 238 ntBASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTC1Q2NKJ3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 ZNF444P1-201ENST00000559497 298 ntBASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 AC112907.3-201ENST00000577781 2400 ntBASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTC1Q2NKJ3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
CTC1Q2NKJ3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 AC246785.2-201ENST00000432512 513 ntBASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 AC112907.2-201ENST00000448639 330 ntBASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 AP003041.3-201ENST00000527151 707 ntBASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 AC020907.5-201ENST00000624372 1936 ntBASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 AL162377.1-201ENST00000618844 1793 ntBASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CTC1Q2NKJ3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms