Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 CHCHD2P8-201ENST00000429873 447 ntBASIC18.65■□□□□ 0.58
CACNA1EQ15878 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNA1EQ15878 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 AC092119.3-201ENST00000612618 583 ntBASIC18.65■□□□□ 0.58
CACNA1EQ15878 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNA1EQ15878 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CACNA1EQ15878 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CACNA1EQ15878 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CACNA1EQ15878 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CACNA1EQ15878 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1EQ15878 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1EQ15878 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1EQ15878 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNA1EQ15878 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CACNA1EQ15878 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1EQ15878 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNA1EQ15878 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1EQ15878 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CACNA1EQ15878 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNA1EQ15878 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.63■□□□□ 0.57
CACNA1EQ15878 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 FAAHP1-202ENST00000446499 1238 ntBASIC18.63■□□□□ 0.57
CACNA1EQ15878 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 EMBP1-201ENST00000458200 901 ntBASIC18.63■□□□□ 0.57
CACNA1EQ15878 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNA1EQ15878 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.63■□□□□ 0.57
CACNA1EQ15878 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 AC007375.3-201ENST00000600936 2314 ntBASIC18.62■□□□□ 0.57
CACNA1EQ15878 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 AL022342.1-201ENST00000400363 863 ntBASIC18.62■□□□□ 0.57
CACNA1EQ15878 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1EQ15878 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CACNA1EQ15878 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1EQ15878 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1EQ15878 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.61■□□□□ 0.57
CACNA1EQ15878 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1EQ15878 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1EQ15878 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1EQ15878 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CACNA1EQ15878 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.61■□□□□ 0.57
CACNA1EQ15878 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms