Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.33□□□□□ -0.6
LRP1Q07954 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LRP1Q07954 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC11.33□□□□□ -0.6
LRP1Q07954 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.33□□□□□ -0.6
LRP1Q07954 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
LRP1Q07954 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.33□□□□□ -0.6
LRP1Q07954 DRAXINP1-201ENST00000437611 948 ntBASIC11.33□□□□□ -0.6
LRP1Q07954 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC11.33□□□□□ -0.6
LRP1Q07954 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.33□□□□□ -0.6
LRP1Q07954 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LRP1Q07954 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.33□□□□□ -0.6
LRP1Q07954 AL121912.1-201ENST00000603683 238 ntBASIC11.33□□□□□ -0.6
LRP1Q07954 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LRP1Q07954 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LRP1Q07954 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC11.33□□□□□ -0.6
LRP1Q07954 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 TSPY22P-201ENST00000427496 604 ntBASIC11.33□□□□□ -0.6
LRP1Q07954 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.33□□□□□ -0.6
LRP1Q07954 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LRP1Q07954 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.33□□□□□ -0.6
LRP1Q07954 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
LRP1Q07954 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC11.32□□□□□ -0.6
LRP1Q07954 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC11.32□□□□□ -0.6
LRP1Q07954 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
LRP1Q07954 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.32□□□□□ -0.6
LRP1Q07954 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LRP1Q07954 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.32□□□□□ -0.6
LRP1Q07954 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.32□□□□□ -0.6
LRP1Q07954 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.32□□□□□ -0.6
LRP1Q07954 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.32□□□□□ -0.6
LRP1Q07954 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LRP1Q07954 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC11.32□□□□□ -0.6
LRP1Q07954 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
LRP1Q07954 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.32□□□□□ -0.6
LRP1Q07954 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LRP1Q07954 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC11.32□□□□□ -0.6
LRP1Q07954 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LRP1Q07954 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LRP1Q07954 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.32□□□□□ -0.6
LRP1Q07954 LINC00265-3P-201ENST00000447588 903 ntBASIC11.32□□□□□ -0.6
LRP1Q07954 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LRP1Q07954 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LRP1Q07954 AF238378.1-201ENST00000526806 358 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 AC055717.3-201ENST00000622967 595 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 AP001271.2-201ENST00000624018 1556 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 AC093525.10-201ENST00000625130 1569 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LRP1Q07954 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 PMS2P1-201ENST00000431037 1228 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 AC034232.1-201ENST00000506026 1064 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 RNF126P1-202ENST00000569893 925 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.31□□□□□ -0.6
LRP1Q07954 MIR3917-201ENST00000580971 93 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 AL512408.1-201ENST00000569378 2000 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC11.31□□□□□ -0.6
LRP1Q07954 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
LRP1Q07954 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC11.31□□□□□ -0.6
LRP1Q07954 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LRP1Q07954 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.31□□□□□ -0.6
LRP1Q07954 KRT8P26-201ENST00000534154 1276 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.31□□□□□ -0.6
LRP1Q07954 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.31□□□□□ -0.6
LRP1Q07954 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 KRT16P6-202ENST00000425692 1426 ntBASIC11.31□□□□□ -0.6
LRP1Q07954 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LRP1Q07954 Z83836.1-201ENST00000624605 1642 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms