Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42EP1Q00587 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42EP1Q00587 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42EP1Q00587 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42EP1Q00587 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42EP1Q00587 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.89■□□□□ 0.94
CDC42EP1Q00587 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDC42EP1Q00587 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDC42EP1Q00587 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDC42EP1Q00587 KRT8P45-201ENST00000414328 1447 ntBASIC20.89■□□□□ 0.94
CDC42EP1Q00587 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CDC42EP1Q00587 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.89■□□□□ 0.94
CDC42EP1Q00587 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 AC011558.1-201ENST00000623459 338 ntBASIC20.89■□□□□ 0.93
CDC42EP1Q00587 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42EP1Q00587 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 KRT8P3-201ENST00000519669 1449 ntBASIC20.88■□□□□ 0.93
CDC42EP1Q00587 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 AC092647.4-201ENST00000457211 535 ntBASIC20.88■□□□□ 0.93
CDC42EP1Q00587 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 AC087388.1-201ENST00000571370 1112 ntBASIC20.88■□□□□ 0.93
CDC42EP1Q00587 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 Z82202.1-201ENST00000623446 1880 ntBASIC20.88■□□□□ 0.93
CDC42EP1Q00587 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42EP1Q00587 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.88■□□□□ 0.93
CDC42EP1Q00587 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.87■□□□□ 0.93
CDC42EP1Q00587 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP1Q00587 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.86■□□□□ 0.93
CDC42EP1Q00587 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP1Q00587 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms