Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.89■□□□□ 0.77
IRX4P78413 LINC01568-207ENST00000641790 1380 ntBASIC19.89■□□□□ 0.77
IRX4P78413 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
IRX4P78413 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
IRX4P78413 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IRX4P78413 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.88■□□□□ 0.77
IRX4P78413 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.88■□□□□ 0.77
IRX4P78413 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
IRX4P78413 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
IRX4P78413 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.88■□□□□ 0.77
IRX4P78413 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.88■□□□□ 0.77
IRX4P78413 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.88■□□□□ 0.77
IRX4P78413 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.88■□□□□ 0.77
IRX4P78413 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
IRX4P78413 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.88■□□□□ 0.77
IRX4P78413 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
IRX4P78413 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.87■□□□□ 0.77
IRX4P78413 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.87■□□□□ 0.77
IRX4P78413 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.87■□□□□ 0.77
IRX4P78413 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.87■□□□□ 0.77
IRX4P78413 AC113347.1-201ENST00000413321 391 ntBASIC19.87■□□□□ 0.77
IRX4P78413 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.87■□□□□ 0.77
IRX4P78413 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.87■□□□□ 0.77
IRX4P78413 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
IRX4P78413 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.87■□□□□ 0.77
IRX4P78413 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
IRX4P78413 AL031963.3-201ENST00000606441 850 ntBASIC19.87■□□□□ 0.77
IRX4P78413 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
IRX4P78413 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 AC093484.2-201ENST00000580996 2166 ntBASIC19.87■□□□□ 0.77
IRX4P78413 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IRX4P78413 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
IRX4P78413 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
IRX4P78413 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.86■□□□□ 0.77
IRX4P78413 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
IRX4P78413 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.86■□□□□ 0.77
IRX4P78413 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.86■□□□□ 0.77
IRX4P78413 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.86■□□□□ 0.77
IRX4P78413 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.86■□□□□ 0.77
IRX4P78413 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
IRX4P78413 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 AC090340.1-201ENST00000620778 4980 ntBASIC19.86■□□□□ 0.77
IRX4P78413 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IRX4P78413 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
IRX4P78413 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
IRX4P78413 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.85■□□□□ 0.77
IRX4P78413 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 AC005332.7-201ENST00000614046 2005 ntBASIC19.85■□□□□ 0.77
IRX4P78413 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.85■□□□□ 0.77
IRX4P78413 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IRX4P78413 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
IRX4P78413 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.85■□□□□ 0.77
IRX4P78413 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.85■□□□□ 0.77
IRX4P78413 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms