Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.15■□□□□ 0.82
USP46P62068 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
USP46P62068 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP46P62068 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP46P62068 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.14■□□□□ 0.81
USP46P62068 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.14■□□□□ 0.81
USP46P62068 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
USP46P62068 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP46P62068 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP46P62068 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP46P62068 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
USP46P62068 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
USP46P62068 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.14■□□□□ 0.81
USP46P62068 AL137013.1-201ENST00000432946 1228 ntBASIC20.14■□□□□ 0.81
USP46P62068 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.14■□□□□ 0.81
USP46P62068 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.14■□□□□ 0.81
USP46P62068 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP46P62068 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP46P62068 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP46P62068 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP46P62068 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
USP46P62068 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.13■□□□□ 0.81
USP46P62068 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 AFG3L1P-217ENST00000557444 2447 ntBASIC20.13■□□□□ 0.81
USP46P62068 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.13■□□□□ 0.81
USP46P62068 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.13■□□□□ 0.81
USP46P62068 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.13■□□□□ 0.81
USP46P62068 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.13■□□□□ 0.81
USP46P62068 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
USP46P62068 AL023803.3-201ENST00000615559 522 ntBASIC20.13■□□□□ 0.81
USP46P62068 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.13■□□□□ 0.81
USP46P62068 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.13■□□□□ 0.81
USP46P62068 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP46P62068 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.12■□□□□ 0.81
USP46P62068 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.12■□□□□ 0.81
USP46P62068 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.12■□□□□ 0.81
USP46P62068 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
USP46P62068 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
USP46P62068 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.12■□□□□ 0.81
USP46P62068 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.12■□□□□ 0.81
USP46P62068 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.12■□□□□ 0.81
USP46P62068 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.12■□□□□ 0.81
USP46P62068 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.12■□□□□ 0.81
USP46P62068 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.12■□□□□ 0.81
USP46P62068 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP46P62068 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.12■□□□□ 0.81
USP46P62068 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.11■□□□□ 0.81
USP46P62068 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 AC092338.2-201ENST00000568827 1415 ntBASIC20.11■□□□□ 0.81
USP46P62068 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.11■□□□□ 0.81
USP46P62068 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.11■□□□□ 0.81
USP46P62068 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.11■□□□□ 0.81
USP46P62068 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
USP46P62068 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.11■□□□□ 0.81
USP46P62068 SLC25A1P2-201ENST00000430693 912 ntBASIC20.11■□□□□ 0.81
USP46P62068 AC007663.1-201ENST00000438948 1240 ntBASIC20.11■□□□□ 0.81
USP46P62068 AC128688.1-201ENST00000487626 519 ntBASIC20.11■□□□□ 0.81
USP46P62068 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.11■□□□□ 0.81
USP46P62068 AC116562.4-202ENST00000641738 218 ntBASIC20.11■□□□□ 0.81
USP46P62068 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.11■□□□□ 0.81
USP46P62068 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.11■□□□□ 0.81
USP46P62068 AL158211.5-201ENST00000623583 2518 ntBASIC20.11■□□□□ 0.81
USP46P62068 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP46P62068 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
USP46P62068 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.1■□□□□ 0.81
USP46P62068 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms