Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2D3P61077 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UBE2D3P61077 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2D3P61077 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.62□□□□□ -0.23
UBE2D3P61077 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.62□□□□□ -0.23
UBE2D3P61077 AC097658.1-201ENST00000475555 843 ntBASIC13.62□□□□□ -0.23
UBE2D3P61077 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.62□□□□□ -0.23
UBE2D3P61077 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.62□□□□□ -0.23
UBE2D3P61077 MYC-209ENST00000641252 345 ntBASIC13.62□□□□□ -0.23
UBE2D3P61077 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UBE2D3P61077 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.62□□□□□ -0.23
UBE2D3P61077 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.62□□□□□ -0.23
UBE2D3P61077 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2D3P61077 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2D3P61077 AC141586.3-201ENST00000562166 1838 ntBASIC13.62□□□□□ -0.23
UBE2D3P61077 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBE2D3P61077 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.61□□□□□ -0.23
UBE2D3P61077 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 AP006587.1-201ENST00000534129 1502 ntBASIC13.61□□□□□ -0.23
UBE2D3P61077 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UBE2D3P61077 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
UBE2D3P61077 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.61□□□□□ -0.23
UBE2D3P61077 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 YBX1P10-201ENST00000444752 975 ntBASIC13.61□□□□□ -0.23
UBE2D3P61077 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.61□□□□□ -0.23
UBE2D3P61077 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.61□□□□□ -0.23
UBE2D3P61077 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.61□□□□□ -0.23
UBE2D3P61077 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.61□□□□□ -0.23
UBE2D3P61077 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D3P61077 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.61□□□□□ -0.23
UBE2D3P61077 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D3P61077 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UBE2D3P61077 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
UBE2D3P61077 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
UBE2D3P61077 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2D3P61077 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 TEX21P-204ENST00000641479 1693 ntBASIC13.6□□□□□ -0.23
UBE2D3P61077 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2D3P61077 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2D3P61077 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2D3P61077 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2D3P61077 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2D3P61077 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2D3P61077 AC060766.5-201ENST00000590539 871 ntBASIC13.6□□□□□ -0.23
UBE2D3P61077 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2D3P61077 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
UBE2D3P61077 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
UBE2D3P61077 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2D3P61077 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D3P61077 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms