Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.7■□□□□ 0.42
PER3P56645 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PER3P56645 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.7■□□□□ 0.42
PER3P56645 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.7■□□□□ 0.42
PER3P56645 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PER3P56645 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PER3P56645 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.7■□□□□ 0.42
PER3P56645 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PER3P56645 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.7■□□□□ 0.42
PER3P56645 AC104076.2-201ENST00000448912 469 ntBASIC17.7■□□□□ 0.42
PER3P56645 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PER3P56645 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PER3P56645 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.7■□□□□ 0.42
PER3P56645 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.7■□□□□ 0.42
PER3P56645 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.7■□□□□ 0.42
PER3P56645 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PER3P56645 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PER3P56645 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.69■□□□□ 0.42
PER3P56645 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 FSCN1P1-201ENST00000568912 1481 ntBASIC17.69■□□□□ 0.42
PER3P56645 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.69■□□□□ 0.42
PER3P56645 AP000974.1-201ENST00000623909 2387 ntBASIC17.69■□□□□ 0.42
PER3P56645 AC005082.1-201ENST00000413042 2259 ntBASIC17.69■□□□□ 0.42
PER3P56645 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.69■□□□□ 0.42
PER3P56645 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PER3P56645 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.69■□□□□ 0.42
PER3P56645 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.69■□□□□ 0.42
PER3P56645 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.69■□□□□ 0.42
PER3P56645 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PER3P56645 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PER3P56645 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.68■□□□□ 0.42
PER3P56645 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.68■□□□□ 0.42
PER3P56645 KRT16P6-202ENST00000425692 1426 ntBASIC17.68■□□□□ 0.42
PER3P56645 EGLN1P1-201ENST00000531623 762 ntBASIC17.68■□□□□ 0.42
PER3P56645 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PER3P56645 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.68■□□□□ 0.42
PER3P56645 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.68■□□□□ 0.42
PER3P56645 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PER3P56645 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.68■□□□□ 0.42
PER3P56645 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PER3P56645 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms