Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.09■□□□□ 0.97
PMS1P54277 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.09■□□□□ 0.97
PMS1P54277 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PMS1P54277 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.08■□□□□ 0.97
PMS1P54277 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 AL031598.1-201ENST00000561511 1773 ntBASIC21.08■□□□□ 0.97
PMS1P54277 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.08■□□□□ 0.97
PMS1P54277 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.08■□□□□ 0.97
PMS1P54277 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.08■□□□□ 0.97
PMS1P54277 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.08■□□□□ 0.97
PMS1P54277 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMS1P54277 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.08■□□□□ 0.97
PMS1P54277 AC004264.1-201ENST00000608354 794 ntBASIC21.08■□□□□ 0.97
PMS1P54277 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.08■□□□□ 0.97
PMS1P54277 AC073648.6-201ENST00000641589 218 ntBASIC21.08■□□□□ 0.97
PMS1P54277 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PMS1P54277 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
PMS1P54277 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PMS1P54277 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PMS1P54277 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PMS1P54277 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PMS1P54277 KRT8P41-201ENST00000533985 1514 ntBASIC21.08■□□□□ 0.96
PMS1P54277 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PMS1P54277 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PMS1P54277 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
PMS1P54277 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PMS1P54277 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PMS1P54277 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.07■□□□□ 0.96
PMS1P54277 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PMS1P54277 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.07■□□□□ 0.96
PMS1P54277 AC239809.2-201ENST00000415381 517 ntBASIC21.07■□□□□ 0.96
PMS1P54277 TSPY23P-201ENST00000440136 739 ntBASIC21.07■□□□□ 0.96
PMS1P54277 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.07■□□□□ 0.96
PMS1P54277 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.07■□□□□ 0.96
PMS1P54277 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.07■□□□□ 0.96
PMS1P54277 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PMS1P54277 AC120498.9-201ENST00000339021 3867 ntBASIC21.07■□□□□ 0.96
PMS1P54277 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.07■□□□□ 0.96
PMS1P54277 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS1P54277 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.07■□□□□ 0.96
PMS1P54277 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PMS1P54277 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PMS1P54277 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PMS1P54277 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.06■□□□□ 0.96
PMS1P54277 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS1P54277 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS1P54277 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PMS1P54277 RN7SL471P-201ENST00000580476 299 ntBASIC21.06■□□□□ 0.96
PMS1P54277 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PMS1P54277 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 AL512353.2-201ENST00000448759 1962 ntBASIC21.06■□□□□ 0.96
PMS1P54277 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
PMS1P54277 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS1P54277 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.06■□□□□ 0.96
PMS1P54277 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.05■□□□□ 0.96
PMS1P54277 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.05■□□□□ 0.96
PMS1P54277 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.05■□□□□ 0.96
PMS1P54277 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.05■□□□□ 0.96
PMS1P54277 AC006058.3-201ENST00000606217 1069 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms