Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKAP51800 CA15P1-201ENST00000481698 905 ntBASIC18.79■□□□□ 0.6
CLCNKAP51800 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLCNKAP51800 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.79■□□□□ 0.6
CLCNKAP51800 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCNKAP51800 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCNKAP51800 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCNKAP51800 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKAP51800 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKAP51800 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKAP51800 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCNKAP51800 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCNKAP51800 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKAP51800 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCNKAP51800 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CLCNKAP51800 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKAP51800 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKAP51800 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
CLCNKAP51800 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCNKAP51800 SLC25A1P2-201ENST00000430693 912 ntBASIC18.78■□□□□ 0.6
CLCNKAP51800 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.78■□□□□ 0.6
CLCNKAP51800 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CLCNKAP51800 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCNKAP51800 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKAP51800 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CLCNKAP51800 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCNKAP51800 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKAP51800 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCNKAP51800 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCNKAP51800 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCNKAP51800 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLCNKAP51800 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKAP51800 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKAP51800 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLCNKAP51800 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKAP51800 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCNKAP51800 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKAP51800 TSPY21P-201ENST00000433481 731 ntBASIC18.77■□□□□ 0.6
CLCNKAP51800 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCNKAP51800 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKAP51800 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCNKAP51800 AC007952.6-201ENST00000573168 2673 ntBASIC18.77■□□□□ 0.6
CLCNKAP51800 AC003957.1-201ENST00000625108 2673 ntBASIC18.77■□□□□ 0.6
CLCNKAP51800 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCNKAP51800 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLCNKAP51800 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CLCNKAP51800 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKAP51800 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCNKAP51800 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CLCNKAP51800 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.77■□□□□ 0.59
CLCNKAP51800 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCNKAP51800 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.77■□□□□ 0.59
CLCNKAP51800 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CLCNKAP51800 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCNKAP51800 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCNKAP51800 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLCNKAP51800 Z82202.1-201ENST00000623446 1880 ntBASIC18.76■□□□□ 0.59
CLCNKAP51800 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 AC128688.1-201ENST00000487626 519 ntBASIC18.76■□□□□ 0.59
CLCNKAP51800 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.76■□□□□ 0.59
CLCNKAP51800 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLCNKAP51800 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CLCNKAP51800 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCNKAP51800 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCNKAP51800 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCNKAP51800 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCNKAP51800 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCNKAP51800 KRT8P11-201ENST00000409686 1436 ntBASIC18.75■□□□□ 0.59
CLCNKAP51800 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCNKAP51800 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms