Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.86■□□□□ 0.29
SOX2P48431 AC005181.1-201ENST00000604782 1256 ntBASIC16.86■□□□□ 0.29
SOX2P48431 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX2P48431 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.86■□□□□ 0.29
SOX2P48431 FP475955.4-201ENST00000623131 1990 ntBASIC16.86■□□□□ 0.29
SOX2P48431 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX2P48431 SDHAP1-207ENST00000440850 2000 ntBASIC16.86■□□□□ 0.29
SOX2P48431 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 AC005332.8-201ENST00000622750 2735 ntBASIC16.85■□□□□ 0.29
SOX2P48431 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX2P48431 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX2P48431 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SOX2P48431 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 AL390719.1-204ENST00000412397 1219 ntBASIC16.85■□□□□ 0.29
SOX2P48431 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX2P48431 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX2P48431 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.85■□□□□ 0.29
SOX2P48431 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX2P48431 PKD1P1-201ENST00000458669 6805 ntBASIC16.85■□□□□ 0.29
SOX2P48431 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SOX2P48431 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SOX2P48431 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SOX2P48431 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX2P48431 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.84■□□□□ 0.29
SOX2P48431 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.84■□□□□ 0.29
SOX2P48431 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SOX2P48431 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.84■□□□□ 0.29
SOX2P48431 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SOX2P48431 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SOX2P48431 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX2P48431 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX2P48431 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SOX2P48431 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX2P48431 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SOX2P48431 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SOX2P48431 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
SOX2P48431 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
SOX2P48431 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SOX2P48431 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SOX2P48431 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SOX2P48431 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.83■□□□□ 0.28
SOX2P48431 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.83■□□□□ 0.28
SOX2P48431 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.83■□□□□ 0.28
SOX2P48431 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.83■□□□□ 0.28
SOX2P48431 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.83■□□□□ 0.28
SOX2P48431 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SOX2P48431 AL031598.1-201ENST00000561511 1773 ntBASIC16.83■□□□□ 0.28
SOX2P48431 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SOX2P48431 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.83■□□□□ 0.28
SOX2P48431 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SOX2P48431 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX2P48431 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX2P48431 AC090164.3-201ENST00000610780 2143 ntBASIC16.82■□□□□ 0.28
SOX2P48431 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX2P48431 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX2P48431 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms