Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX2-1P43699 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NKX2-1P43699 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX2-1P43699 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NKX2-1P43699 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-1P43699 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.68■□□□□ 0.1
NKX2-1P43699 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.68■□□□□ 0.1
NKX2-1P43699 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NKX2-1P43699 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.68■□□□□ 0.1
NKX2-1P43699 ZNRF2P3-201ENST00000424200 374 ntBASIC15.68■□□□□ 0.1
NKX2-1P43699 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-1P43699 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.68■□□□□ 0.1
NKX2-1P43699 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-1P43699 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX2-1P43699 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NKX2-1P43699 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-1P43699 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-1P43699 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-1P43699 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NKX2-1P43699 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-1P43699 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-1P43699 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-1P43699 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX2-1P43699 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-1P43699 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-1P43699 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-1P43699 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 KRT18P68-201ENST00000392293 1000 ntBASIC15.67■□□□□ 0.1
NKX2-1P43699 KRT18P14-201ENST00000534205 1250 ntBASIC15.67■□□□□ 0.1
NKX2-1P43699 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-1P43699 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-1P43699 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX2-1P43699 AC010536.3-201ENST00000620306 533 ntBASIC15.67■□□□□ 0.1
NKX2-1P43699 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 AC068880.1-201ENST00000507289 2297 ntBASIC15.67■□□□□ 0.1
NKX2-1P43699 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-1P43699 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-1P43699 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-1P43699 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-1P43699 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-1P43699 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NKX2-1P43699 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-1P43699 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-1P43699 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NKX2-1P43699 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-1P43699 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX2-1P43699 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-1P43699 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.66■□□□□ 0.1
NKX2-1P43699 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.66■□□□□ 0.1
NKX2-1P43699 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NKX2-1P43699 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NKX2-1P43699 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NKX2-1P43699 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NKX2-1P43699 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX2-1P43699 AC116351.2-201ENST00000606540 1585 ntBASIC15.66■□□□□ 0.1
NKX2-1P43699 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-1P43699 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms