Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.33■□□□□ 0.68
CHRNA4P43681 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHRNA4P43681 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.33■□□□□ 0.68
CHRNA4P43681 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.33■□□□□ 0.68
CHRNA4P43681 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.33■□□□□ 0.68
CHRNA4P43681 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.33■□□□□ 0.68
CHRNA4P43681 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHRNA4P43681 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.33■□□□□ 0.68
CHRNA4P43681 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CHRNA4P43681 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNA4P43681 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA4P43681 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHRNA4P43681 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNA4P43681 FP475955.4-201ENST00000623131 1990 ntBASIC19.32■□□□□ 0.68
CHRNA4P43681 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CHRNA4P43681 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHRNA4P43681 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 FAM197Y1-201ENST00000421178 764 ntBASIC19.32■□□□□ 0.68
CHRNA4P43681 TSPY23P-201ENST00000440136 739 ntBASIC19.32■□□□□ 0.68
CHRNA4P43681 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHRNA4P43681 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.32■□□□□ 0.68
CHRNA4P43681 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.32■□□□□ 0.68
CHRNA4P43681 AC073195.1-201ENST00000607241 877 ntBASIC19.32■□□□□ 0.68
CHRNA4P43681 AC131212.4-201ENST00000623606 975 ntBASIC19.32■□□□□ 0.68
CHRNA4P43681 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA4P43681 KRT16P1-201ENST00000399124 1418 ntBASIC19.32■□□□□ 0.68
CHRNA4P43681 TNXA-203ENST00000507684 2038 ntBASIC19.32■□□□□ 0.68
CHRNA4P43681 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CHRNA4P43681 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNA4P43681 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNA4P43681 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRNA4P43681 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNA4P43681 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNA4P43681 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNA4P43681 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CHRNA4P43681 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.31■□□□□ 0.68
CHRNA4P43681 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRNA4P43681 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.31■□□□□ 0.68
CHRNA4P43681 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHRNA4P43681 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRNA4P43681 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA4P43681 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHRNA4P43681 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CHRNA4P43681 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.3■□□□□ 0.68
CHRNA4P43681 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHRNA4P43681 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHRNA4P43681 RPS2P55-201ENST00000397318 883 ntBASIC19.3■□□□□ 0.68
CHRNA4P43681 AC107956.1-201ENST00000494359 873 ntBASIC19.3■□□□□ 0.68
CHRNA4P43681 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.3■□□□□ 0.68
CHRNA4P43681 Z99916.2-201ENST00000604037 246 ntBASIC19.3■□□□□ 0.68
CHRNA4P43681 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.3■□□□□ 0.68
CHRNA4P43681 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CHRNA4P43681 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA4P43681 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHRNA4P43681 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNA4P43681 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNA4P43681 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNA4P43681 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNA4P43681 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNA4P43681 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms