Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
SSR1P43307 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SSR1P43307 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.34■□□□□ 0.85
SSR1P43307 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSR1P43307 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.34■□□□□ 0.85
SSR1P43307 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
SSR1P43307 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SSR1P43307 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.33■□□□□ 0.85
SSR1P43307 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.33■□□□□ 0.85
SSR1P43307 AL121829.2-201ENST00000620908 328 ntBASIC20.33■□□□□ 0.85
SSR1P43307 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR1P43307 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
SSR1P43307 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSR1P43307 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SSR1P43307 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSR1P43307 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSR1P43307 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 TNXA-203ENST00000507684 2038 ntBASIC20.32■□□□□ 0.84
SSR1P43307 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.32■□□□□ 0.84
SSR1P43307 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SSR1P43307 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SSR1P43307 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.32■□□□□ 0.84
SSR1P43307 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.32■□□□□ 0.84
SSR1P43307 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.32■□□□□ 0.84
SSR1P43307 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.32■□□□□ 0.84
SSR1P43307 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 KRT8P8-201ENST00000434750 1448 ntBASIC20.32■□□□□ 0.84
SSR1P43307 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.32■□□□□ 0.84
SSR1P43307 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR1P43307 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.32■□□□□ 0.84
SSR1P43307 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SSR1P43307 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SSR1P43307 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
SSR1P43307 LINC01465-201ENST00000408887 1940 ntBASIC20.31■□□□□ 0.84
SSR1P43307 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.31■□□□□ 0.84
SSR1P43307 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.31■□□□□ 0.84
SSR1P43307 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.31■□□□□ 0.84
SSR1P43307 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
SSR1P43307 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.31■□□□□ 0.84
SSR1P43307 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 ID1-201ENST00000376105 1233 ntBASIC20.31■□□□□ 0.84
SSR1P43307 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.31■□□□□ 0.84
SSR1P43307 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 TUBB8P6-201ENST00000436895 1288 ntBASIC20.31■□□□□ 0.84
SSR1P43307 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SSR1P43307 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SSR1P43307 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.31■□□□□ 0.84
SSR1P43307 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR1P43307 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
SSR1P43307 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SSR1P43307 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SSR1P43307 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SSR1P43307 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.3■□□□□ 0.84
SSR1P43307 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.3■□□□□ 0.84
SSR1P43307 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.3■□□□□ 0.84
SSR1P43307 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR1P43307 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.29■□□□□ 0.84
SSR1P43307 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 TEX21P-204ENST00000641479 1693 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms