Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.43■■□□□ 1.5
ATP6V1AP38606 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V1AP38606 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V1AP38606 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V1AP38606 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V1AP38606 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V1AP38606 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V1AP38606 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.42■■□□□ 1.5
ATP6V1AP38606 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1AP38606 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1AP38606 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1AP38606 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1AP38606 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1AP38606 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.41■■□□□ 1.5
ATP6V1AP38606 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.41■■□□□ 1.5
ATP6V1AP38606 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.41■■□□□ 1.5
ATP6V1AP38606 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1AP38606 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1AP38606 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.41■■□□□ 1.5
ATP6V1AP38606 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1AP38606 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1AP38606 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1AP38606 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1AP38606 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1AP38606 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 AP002414.4-201ENST00000589764 1148 ntBASIC24.4■■□□□ 1.5
ATP6V1AP38606 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 AC036111.1-201ENST00000533973 1582 ntBASIC24.4■■□□□ 1.5
ATP6V1AP38606 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1AP38606 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1AP38606 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1AP38606 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP6V1AP38606 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1AP38606 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATP6V1AP38606 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATP6V1AP38606 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.39■■□□□ 1.5
ATP6V1AP38606 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ATP6V1AP38606 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.39■■□□□ 1.5
ATP6V1AP38606 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATP6V1AP38606 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
ATP6V1AP38606 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
ATP6V1AP38606 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 PVRIG2P-201ENST00000435460 978 ntBASIC24.39■■□□□ 1.49
ATP6V1AP38606 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.49
ATP6V1AP38606 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
ATP6V1AP38606 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.39■■□□□ 1.49
ATP6V1AP38606 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V1AP38606 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.38■■□□□ 1.49
ATP6V1AP38606 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1AP38606 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.38■■□□□ 1.49
ATP6V1AP38606 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1AP38606 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1AP38606 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1AP38606 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1AP38606 AL023284.2-201ENST00000405850 579 ntBASIC24.38■■□□□ 1.49
ATP6V1AP38606 AP000347.1-202ENST00000435868 847 ntBASIC24.38■■□□□ 1.49
ATP6V1AP38606 KRT17P6-201ENST00000453795 1220 ntBASIC24.38■■□□□ 1.49
ATP6V1AP38606 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1AP38606 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V1AP38606 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
ATP6V1AP38606 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V1AP38606 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V1AP38606 AC079602.3-201ENST00000623931 403 ntBASIC24.38■■□□□ 1.49
ATP6V1AP38606 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V1AP38606 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1AP38606 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
ATP6V1AP38606 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1AP38606 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms