Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDE6BP35913 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE6BP35913 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDE6BP35913 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDE6BP35913 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.62■■□□□ 1.37
PDE6BP35913 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE6BP35913 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PDE6BP35913 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE6BP35913 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.62■■□□□ 1.37
PDE6BP35913 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
PDE6BP35913 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE6BP35913 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.62■■□□□ 1.37
PDE6BP35913 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.62■■□□□ 1.37
PDE6BP35913 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.62■■□□□ 1.37
PDE6BP35913 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.62■■□□□ 1.37
PDE6BP35913 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.62■■□□□ 1.37
PDE6BP35913 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.62■■□□□ 1.37
PDE6BP35913 AC104417.2-201ENST00000562989 1793 ntBASIC23.62■■□□□ 1.37
PDE6BP35913 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE6BP35913 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.62■■□□□ 1.37
PDE6BP35913 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE6BP35913 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.61■■□□□ 1.37
PDE6BP35913 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PDE6BP35913 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.61■■□□□ 1.37
PDE6BP35913 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.61■■□□□ 1.37
PDE6BP35913 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PDE6BP35913 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PDE6BP35913 TSPY19P-201ENST00000418461 509 ntBASIC23.61■■□□□ 1.37
PDE6BP35913 TSPY18P-201ENST00000441642 509 ntBASIC23.61■■□□□ 1.37
PDE6BP35913 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.61■■□□□ 1.37
PDE6BP35913 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.61■■□□□ 1.37
PDE6BP35913 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.61■■□□□ 1.37
PDE6BP35913 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE6BP35913 AC036111.1-201ENST00000533973 1582 ntBASIC23.61■■□□□ 1.37
PDE6BP35913 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PDE6BP35913 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
PDE6BP35913 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.6■■□□□ 1.37
PDE6BP35913 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE6BP35913 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PDE6BP35913 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 HLA-F-220ENST00000434407 884 ntBASIC23.6■■□□□ 1.37
PDE6BP35913 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE6BP35913 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 EMBP1-201ENST00000458200 901 ntBASIC23.6■■□□□ 1.37
PDE6BP35913 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE6BP35913 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 AC079602.3-201ENST00000623931 403 ntBASIC23.6■■□□□ 1.37
PDE6BP35913 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.6■■□□□ 1.37
PDE6BP35913 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE6BP35913 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.6■■□□□ 1.37
PDE6BP35913 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE6BP35913 KRT18P1-202ENST00000452408 1331 ntBASIC23.59■■□□□ 1.37
PDE6BP35913 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE6BP35913 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE6BP35913 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PDE6BP35913 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE6BP35913 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE6BP35913 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE6BP35913 AL023284.2-201ENST00000405850 579 ntBASIC23.59■■□□□ 1.37
PDE6BP35913 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.59■■□□□ 1.37
PDE6BP35913 SEC1P-202ENST00000473944 940 ntBASIC23.59■■□□□ 1.37
PDE6BP35913 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.59■■□□□ 1.37
PDE6BP35913 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.59■■□□□ 1.37
PDE6BP35913 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PDE6BP35913 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.59■■□□□ 1.37
PDE6BP35913 AP005212.1-201ENST00000581547 1997 ntBASIC23.59■■□□□ 1.37
PDE6BP35913 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.59■■□□□ 1.37
PDE6BP35913 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE6BP35913 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE6BP35913 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE6BP35913 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDE6BP35913 AC009078.2-202ENST00000463353 338 ntBASIC23.58■■□□□ 1.37
PDE6BP35913 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.58■■□□□ 1.37
PDE6BP35913 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms