Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.18■□□□□ 0.82
RFC1P35251 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.18■□□□□ 0.82
RFC1P35251 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RFC1P35251 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RFC1P35251 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RFC1P35251 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RFC1P35251 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 ABHD17AP1-201ENST00000358206 933 ntBASIC20.17■□□□□ 0.82
RFC1P35251 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RFC1P35251 AC098590.1-201ENST00000468126 897 ntBASIC20.17■□□□□ 0.82
RFC1P35251 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.17■□□□□ 0.82
RFC1P35251 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RFC1P35251 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.17■□□□□ 0.82
RFC1P35251 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.17■□□□□ 0.82
RFC1P35251 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RFC1P35251 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RFC1P35251 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RFC1P35251 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RFC1P35251 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFC1P35251 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.16■□□□□ 0.82
RFC1P35251 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC1P35251 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC1P35251 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC1P35251 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.16■□□□□ 0.82
RFC1P35251 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RFC1P35251 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RFC1P35251 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RFC1P35251 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC1P35251 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RFC1P35251 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.16■□□□□ 0.82
RFC1P35251 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC1P35251 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC1P35251 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RFC1P35251 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC1P35251 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.16■□□□□ 0.82
RFC1P35251 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RFC1P35251 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC1P35251 NIFKP9-201ENST00000419265 221 ntBASIC20.15■□□□□ 0.82
RFC1P35251 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.15■□□□□ 0.82
RFC1P35251 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC1P35251 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.15■□□□□ 0.82
RFC1P35251 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.15■□□□□ 0.82
RFC1P35251 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.15■□□□□ 0.82
RFC1P35251 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC1P35251 FAM197Y4-202ENST00000622692 608 ntBASIC20.15■□□□□ 0.82
RFC1P35251 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.15■□□□□ 0.82
RFC1P35251 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC1P35251 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC1P35251 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.15■□□□□ 0.82
RFC1P35251 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC1P35251 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RFC1P35251 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RFC1P35251 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RFC1P35251 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.14■□□□□ 0.81
RFC1P35251 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 KRT8P41-201ENST00000533985 1514 ntBASIC20.14■□□□□ 0.81
RFC1P35251 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC1P35251 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC1P35251 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.14■□□□□ 0.81
RFC1P35251 RPS2P4-201ENST00000476944 856 ntBASIC20.14■□□□□ 0.81
RFC1P35251 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.14■□□□□ 0.81
RFC1P35251 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC1P35251 AC142381.4-202ENST00000563973 229 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms