Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACKR3P25106 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ACKR3P25106 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACKR3P25106 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ACKR3P25106 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ACKR3P25106 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.63■□□□□ 0.25
ACKR3P25106 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ACKR3P25106 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 AC120498.9-201ENST00000339021 3867 ntBASIC16.63■□□□□ 0.25
ACKR3P25106 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.63■□□□□ 0.25
ACKR3P25106 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.63■□□□□ 0.25
ACKR3P25106 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.63■□□□□ 0.25
ACKR3P25106 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ACKR3P25106 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.63■□□□□ 0.25
ACKR3P25106 PRKY-204ENST00000533551 1019 ntBASIC16.63■□□□□ 0.25
ACKR3P25106 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ACKR3P25106 MTDHP1-201ENST00000605323 784 ntBASIC16.63■□□□□ 0.25
ACKR3P25106 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.63■□□□□ 0.25
ACKR3P25106 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ACKR3P25106 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ACKR3P25106 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ACKR3P25106 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ACKR3P25106 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ACKR3P25106 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ACKR3P25106 AC093503.3-201ENST00000624917 2352 ntBASIC16.63■□□□□ 0.25
ACKR3P25106 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.62■□□□□ 0.25
ACKR3P25106 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.62■□□□□ 0.25
ACKR3P25106 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ACKR3P25106 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.62■□□□□ 0.25
ACKR3P25106 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 NBPF21P-201ENST00000425093 1451 ntBASIC16.62■□□□□ 0.25
ACKR3P25106 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.62■□□□□ 0.25
ACKR3P25106 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ACKR3P25106 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ACKR3P25106 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.62■□□□□ 0.25
ACKR3P25106 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.62■□□□□ 0.25
ACKR3P25106 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ACKR3P25106 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.62■□□□□ 0.25
ACKR3P25106 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
ACKR3P25106 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ACKR3P25106 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ACKR3P25106 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.61■□□□□ 0.25
ACKR3P25106 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACKR3P25106 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.61■□□□□ 0.25
ACKR3P25106 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACKR3P25106 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.61■□□□□ 0.25
ACKR3P25106 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.61■□□□□ 0.25
ACKR3P25106 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ACKR3P25106 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.61■□□□□ 0.25
ACKR3P25106 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.61■□□□□ 0.25
ACKR3P25106 KRT17P3-201ENST00000420566 1262 ntBASIC16.61■□□□□ 0.25
ACKR3P25106 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACKR3P25106 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ACKR3P25106 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.61■□□□□ 0.25
ACKR3P25106 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.61■□□□□ 0.25
ACKR3P25106 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACKR3P25106 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACKR3P25106 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.61■□□□□ 0.25
ACKR3P25106 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACKR3P25106 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.61■□□□□ 0.25
ACKR3P25106 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.61■□□□□ 0.25
ACKR3P25106 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
ACKR3P25106 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACKR3P25106 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ACKR3P25106 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ACKR3P25106 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms