Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XPAP23025 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
XPAP23025 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XPAP23025 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
XPAP23025 ECEL1P3-201ENST00000427961 737 ntBASIC19.34■□□□□ 0.69
XPAP23025 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.34■□□□□ 0.69
XPAP23025 NAPSB-206ENST00000562112 1266 ntBASIC19.34■□□□□ 0.69
XPAP23025 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
XPAP23025 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.34■□□□□ 0.69
XPAP23025 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.34■□□□□ 0.69
XPAP23025 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XPAP23025 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
XPAP23025 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.34■□□□□ 0.69
XPAP23025 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XPAP23025 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
XPAP23025 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.34■□□□□ 0.69
XPAP23025 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
XPAP23025 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
XPAP23025 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
XPAP23025 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.33■□□□□ 0.69
XPAP23025 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
XPAP23025 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
XPAP23025 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.33■□□□□ 0.68
XPAP23025 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
XPAP23025 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.33■□□□□ 0.68
XPAP23025 C2orf69P3-201ENST00000565542 1120 ntBASIC19.33■□□□□ 0.68
XPAP23025 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.33■□□□□ 0.68
XPAP23025 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
XPAP23025 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.33■□□□□ 0.68
XPAP23025 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
XPAP23025 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.33■□□□□ 0.68
XPAP23025 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.33■□□□□ 0.68
XPAP23025 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
XPAP23025 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
XPAP23025 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
XPAP23025 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.32■□□□□ 0.68
XPAP23025 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XPAP23025 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
XPAP23025 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.32■□□□□ 0.68
XPAP23025 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
XPAP23025 AC104417.2-201ENST00000562989 1793 ntBASIC19.32■□□□□ 0.68
XPAP23025 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XPAP23025 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
XPAP23025 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.32■□□□□ 0.68
XPAP23025 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.32■□□□□ 0.68
XPAP23025 AC008040.2-201ENST00000461049 708 ntBASIC19.32■□□□□ 0.68
XPAP23025 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.32■□□□□ 0.68
XPAP23025 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.32■□□□□ 0.68
XPAP23025 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.32■□□□□ 0.68
XPAP23025 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
XPAP23025 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.32■□□□□ 0.68
XPAP23025 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
XPAP23025 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
XPAP23025 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.32■□□□□ 0.68
XPAP23025 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
XPAP23025 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XPAP23025 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XPAP23025 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.32■□□□□ 0.68
XPAP23025 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
XPAP23025 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
XPAP23025 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.31■□□□□ 0.68
XPAP23025 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
XPAP23025 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 AC120498.9-201ENST00000339021 3867 ntBASIC19.31■□□□□ 0.68
XPAP23025 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.31■□□□□ 0.68
XPAP23025 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.31■□□□□ 0.68
XPAP23025 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.31■□□□□ 0.68
XPAP23025 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.31■□□□□ 0.68
XPAP23025 MFAP1P1-201ENST00000442257 1255 ntBASIC19.31■□□□□ 0.68
XPAP23025 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.31■□□□□ 0.68
XPAP23025 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.31■□□□□ 0.68
XPAP23025 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.31■□□□□ 0.68
XPAP23025 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.31■□□□□ 0.68
XPAP23025 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.31■□□□□ 0.68
XPAP23025 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.31■□□□□ 0.68
XPAP23025 AP005242.2-201ENST00000580065 1175 ntBASIC19.31■□□□□ 0.68
XPAP23025 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.31■□□□□ 0.68
XPAP23025 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.31■□□□□ 0.68
XPAP23025 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.31■□□□□ 0.68
XPAP23025 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.31■□□□□ 0.68
XPAP23025 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XPAP23025 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.3■□□□□ 0.68
XPAP23025 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.3■□□□□ 0.68
XPAP23025 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.3■□□□□ 0.68
XPAP23025 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.3■□□□□ 0.68
XPAP23025 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms