Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
KCNA3P22001 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.52■■□□□ 1.36
KCNA3P22001 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.52■■□□□ 1.36
KCNA3P22001 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
KCNA3P22001 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 AC036111.1-201ENST00000533973 1582 ntBASIC23.52■■□□□ 1.36
KCNA3P22001 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
KCNA3P22001 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 AC012676.1-201ENST00000574705 1949 ntBASIC23.51■■□□□ 1.35
KCNA3P22001 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
KCNA3P22001 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.51■■□□□ 1.35
KCNA3P22001 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.51■■□□□ 1.35
KCNA3P22001 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.51■■□□□ 1.35
KCNA3P22001 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.51■■□□□ 1.35
KCNA3P22001 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.51■■□□□ 1.35
KCNA3P22001 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.51■■□□□ 1.35
KCNA3P22001 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.51■■□□□ 1.35
KCNA3P22001 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.51■■□□□ 1.35
KCNA3P22001 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KCNA3P22001 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNA3P22001 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.5■■□□□ 1.35
KCNA3P22001 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KCNA3P22001 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNA3P22001 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNA3P22001 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNA3P22001 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
KCNA3P22001 AL023284.2-201ENST00000405850 579 ntBASIC23.5■■□□□ 1.35
KCNA3P22001 PMS2P1-201ENST00000431037 1228 ntBASIC23.5■■□□□ 1.35
KCNA3P22001 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.5■■□□□ 1.35
KCNA3P22001 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.5■■□□□ 1.35
KCNA3P22001 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.5■■□□□ 1.35
KCNA3P22001 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.5■■□□□ 1.35
KCNA3P22001 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNA3P22001 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KCNA3P22001 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
KCNA3P22001 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
KCNA3P22001 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KCNA3P22001 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
KCNA3P22001 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.49■■□□□ 1.35
KCNA3P22001 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.49■■□□□ 1.35
KCNA3P22001 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KCNA3P22001 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
KCNA3P22001 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNA3P22001 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNA3P22001 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNA3P22001 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNA3P22001 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
KCNA3P22001 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KCNA3P22001 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.49■■□□□ 1.35
KCNA3P22001 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
KCNA3P22001 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.49■■□□□ 1.35
KCNA3P22001 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNA3P22001 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
KCNA3P22001 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KCNA3P22001 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.49■■□□□ 1.35
KCNA3P22001 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
KCNA3P22001 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.48■■□□□ 1.35
KCNA3P22001 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNA3P22001 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KCNA3P22001 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
KCNA3P22001 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNA3P22001 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.48■■□□□ 1.35
KCNA3P22001 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
KCNA3P22001 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.48■■□□□ 1.35
KCNA3P22001 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.48■■□□□ 1.35
KCNA3P22001 AC092183.1-201ENST00000469884 875 ntBASIC23.48■■□□□ 1.35
KCNA3P22001 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.48■■□□□ 1.35
KCNA3P22001 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.48■■□□□ 1.35
KCNA3P22001 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNA3P22001 MIR3917-201ENST00000580971 93 ntBASIC23.48■■□□□ 1.35
KCNA3P22001 AC138894.3-201ENST00000603787 634 ntBASIC23.48■■□□□ 1.35
KCNA3P22001 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KCNA3P22001 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KCNA3P22001 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.47■■□□□ 1.35
KCNA3P22001 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
KCNA3P22001 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KCNA3P22001 AC104819.1-201ENST00000504587 486 ntBASIC23.47■■□□□ 1.35
KCNA3P22001 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.47■■□□□ 1.35
KCNA3P22001 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms