Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2CP19387 SDHAP1-207ENST00000440850 2000 ntBASIC18.56■□□□□ 0.56
POLR2CP19387 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 LINC01568-207ENST00000641790 1380 ntBASIC18.55■□□□□ 0.56
POLR2CP19387 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
POLR2CP19387 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR2CP19387 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
POLR2CP19387 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR2CP19387 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR2CP19387 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.55■□□□□ 0.56
POLR2CP19387 AC012306.2-201ENST00000609350 630 ntBASIC18.55■□□□□ 0.56
POLR2CP19387 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR2CP19387 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2CP19387 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR2CP19387 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
POLR2CP19387 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.54■□□□□ 0.56
POLR2CP19387 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.54■□□□□ 0.56
POLR2CP19387 AL020996.1-203ENST00000536896 2307 ntBASIC18.54■□□□□ 0.56
POLR2CP19387 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.54■□□□□ 0.56
POLR2CP19387 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.54■□□□□ 0.56
POLR2CP19387 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.54■□□□□ 0.56
POLR2CP19387 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.54■□□□□ 0.56
POLR2CP19387 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 C2orf69P3-201ENST00000565542 1120 ntBASIC18.54■□□□□ 0.56
POLR2CP19387 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.54■□□□□ 0.56
POLR2CP19387 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.54■□□□□ 0.56
POLR2CP19387 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.54■□□□□ 0.56
POLR2CP19387 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.54■□□□□ 0.56
POLR2CP19387 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.54■□□□□ 0.56
POLR2CP19387 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2CP19387 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
POLR2CP19387 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
POLR2CP19387 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.53■□□□□ 0.56
POLR2CP19387 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.53■□□□□ 0.56
POLR2CP19387 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.53■□□□□ 0.56
POLR2CP19387 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.53■□□□□ 0.56
POLR2CP19387 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.53■□□□□ 0.56
POLR2CP19387 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.53■□□□□ 0.56
POLR2CP19387 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 AC096733.2-201ENST00000609937 1394 ntBASIC18.53■□□□□ 0.56
POLR2CP19387 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2CP19387 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
POLR2CP19387 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
POLR2CP19387 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2CP19387 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
POLR2CP19387 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.52■□□□□ 0.56
POLR2CP19387 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
POLR2CP19387 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
POLR2CP19387 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2CP19387 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
POLR2CP19387 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.52■□□□□ 0.56
POLR2CP19387 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.52■□□□□ 0.56
POLR2CP19387 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.52■□□□□ 0.56
POLR2CP19387 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.52■□□□□ 0.56
POLR2CP19387 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.52■□□□□ 0.56
POLR2CP19387 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2CP19387 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2CP19387 AC145285.6-201ENST00000604632 637 ntBASIC18.52■□□□□ 0.56
POLR2CP19387 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2CP19387 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2CP19387 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.52■□□□□ 0.55
POLR2CP19387 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
POLR2CP19387 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
POLR2CP19387 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
POLR2CP19387 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms