Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 FP475955.4-201ENST00000623131 1990 ntBASIC16.79■□□□□ 0.28
UBCP0CG48 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.79■□□□□ 0.28
UBCP0CG48 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.79■□□□□ 0.28
UBCP0CG48 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.79■□□□□ 0.28
UBCP0CG48 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.79■□□□□ 0.28
UBCP0CG48 AC083906.2-201ENST00000511578 360 ntBASIC16.79■□□□□ 0.28
UBCP0CG48 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBCP0CG48 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.79■□□□□ 0.28
UBCP0CG48 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 LTB4R2-202ENST00000528054 3092 ntBASIC16.79■□□□□ 0.28
UBCP0CG48 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.79■□□□□ 0.28
UBCP0CG48 IRX1P1-201ENST00000438849 1838 ntBASIC16.79■□□□□ 0.28
UBCP0CG48 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.79■□□□□ 0.28
UBCP0CG48 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.78■□□□□ 0.28
UBCP0CG48 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UBCP0CG48 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UBCP0CG48 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.78■□□□□ 0.28
UBCP0CG48 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UBCP0CG48 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBCP0CG48 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.78■□□□□ 0.28
UBCP0CG48 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.78■□□□□ 0.28
UBCP0CG48 MIR4758-201ENST00000577688 71 ntBASIC16.78■□□□□ 0.28
UBCP0CG48 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
UBCP0CG48 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.78■□□□□ 0.28
UBCP0CG48 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBCP0CG48 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.78■□□□□ 0.28
UBCP0CG48 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBCP0CG48 AC007613.1-201ENST00000572811 2597 ntBASIC16.78■□□□□ 0.28
UBCP0CG48 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBCP0CG48 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBCP0CG48 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UBCP0CG48 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.77■□□□□ 0.28
UBCP0CG48 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBCP0CG48 AC005332.8-201ENST00000622750 2735 ntBASIC16.77■□□□□ 0.28
UBCP0CG48 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBCP0CG48 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
UBCP0CG48 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UBCP0CG48 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
UBCP0CG48 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
UBCP0CG48 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
UBCP0CG48 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
UBCP0CG48 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBCP0CG48 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.77■□□□□ 0.28
UBCP0CG48 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.77■□□□□ 0.28
UBCP0CG48 KRT18P16-201ENST00000510337 1294 ntBASIC16.77■□□□□ 0.28
UBCP0CG48 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.77■□□□□ 0.28
UBCP0CG48 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.77■□□□□ 0.28
UBCP0CG48 AC079598.2-202ENST00000546624 1451 ntBASIC16.77■□□□□ 0.28
UBCP0CG48 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBCP0CG48 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBCP0CG48 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBCP0CG48 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.77■□□□□ 0.27
UBCP0CG48 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
UBCP0CG48 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBCP0CG48 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBCP0CG48 AC093525.10-201ENST00000625130 1569 ntBASIC16.77■□□□□ 0.27
UBCP0CG48 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 BCL2-203ENST00000589955 5011 ntBASIC16.76■□□□□ 0.27
UBCP0CG48 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.76■□□□□ 0.27
UBCP0CG48 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UBCP0CG48 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
UBCP0CG48 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBCP0CG48 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.76■□□□□ 0.27
UBCP0CG48 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.76■□□□□ 0.27
UBCP0CG48 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
UBCP0CG48 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.76■□□□□ 0.27
UBCP0CG48 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.76■□□□□ 0.27
UBCP0CG48 AC097658.1-201ENST00000475555 843 ntBASIC16.76■□□□□ 0.27
UBCP0CG48 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.76■□□□□ 0.27
UBCP0CG48 AC060766.5-201ENST00000590539 871 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms